Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.94■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gm45444-201ENSMUST00000211394 898 ntBASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav15d-1-dv6d-1A0A075B624 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Gm10399-202ENSMUST00000202768 748 ntBASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms