Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm43530-201ENSMUST00000195920 274 ntBASIC14.52□□□□□ -0.09
Trav13d-1A0A075B606 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.52□□□□□ -0.09
Trav13d-1A0A075B606 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-1A0A075B606 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-1A0A075B606 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav13d-1A0A075B606 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Iqck-206ENSMUST00000208658 2891 ntBASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-1A0A075B606 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-1A0A075B606 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav13d-1A0A075B606 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Gm8493-201ENSMUST00000196881 489 ntBASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Gm6139-201ENSMUST00000079261 882 ntBASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13d-1A0A075B606 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms