Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 1700126A01Rik-201ENSMUST00000185283 2061 ntBASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Ttc5-202ENSMUST00000226768 2366 ntBASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm26013-201ENSMUST00000104404 119 ntBASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm24398-201ENSMUST00000157870 109 ntBASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Rtp3-203ENSMUST00000199891 2463 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm42997-202ENSMUST00000200321 985 ntBASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm15708-201ENSMUST00000156467 1765 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Ccnd1-201ENSMUST00000093962 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gtf3c6Q9D8P7 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 AC154355.1-201ENSMUST00000224604 2162 ntBASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Scnn1a-207ENSMUST00000177329 2807 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm44848-201ENSMUST00000207808 3234 ntBASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm6754-201ENSMUST00000117124 913 ntBASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm16518-201ENSMUST00000117960 508 ntBASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm12029-201ENSMUST00000120073 832 ntBASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm44158-201ENSMUST00000203881 505 ntBASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gtf3c6Q9D8P7 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms