Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.23□□□□□ -0.61
RAB40CQ96S21 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 POM121L10P-201ENST00000436994 1285 ntBASIC11.23□□□□□ -0.61
RAB40CQ96S21 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 COX20P2-201ENST00000452636 358 ntBASIC11.23□□□□□ -0.61
RAB40CQ96S21 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 AC133540.1-201ENST00000620845 1019 ntBASIC11.23□□□□□ -0.61
RAB40CQ96S21 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 E2F3P2-201ENST00000447755 1422 ntBASIC11.23□□□□□ -0.61
RAB40CQ96S21 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 CU639417.3-201ENST00000624240 1404 ntBASIC11.23□□□□□ -0.61
RAB40CQ96S21 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 AC020763.3-201ENST00000625095 2904 ntBASIC11.23□□□□□ -0.61
RAB40CQ96S21 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 AC244394.1-201ENST00000435000 1665 ntBASIC11.23□□□□□ -0.61
RAB40CQ96S21 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB40CQ96S21 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.23□□□□□ -0.61
RAB40CQ96S21 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AL512384.1-201ENST00000406683 331 ntBASIC11.22□□□□□ -0.61
RAB40CQ96S21 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC092580.1-201ENST00000433998 658 ntBASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RAB40CQ96S21 CHCHD2P2-201ENST00000503744 321 ntBASIC11.22□□□□□ -0.61
RAB40CQ96S21 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 AP001889.1-201ENST00000525414 633 ntBASIC11.22□□□□□ -0.61
RAB40CQ96S21 SLC25A47P1-201ENST00000531577 414 ntBASIC11.22□□□□□ -0.61
RAB40CQ96S21 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC11.22□□□□□ -0.61
RAB40CQ96S21 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms