Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps53Q8CCB4 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps53Q8CCB4 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps53Q8CCB4 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.39□□□□□ -0.43
Vps53Q8CCB4 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps53Q8CCB4 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps53Q8CCB4 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm7967-202ENSMUST00000191042 5042 ntBASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm26368-201ENSMUST00000157826 118 ntBASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm5529-201ENSMUST00000165691 891 ntBASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.38□□□□□ -0.43
Vps53Q8CCB4 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.38□□□□□ -0.43
Vps53Q8CCB4 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm23061-201ENSMUST00000102348 116 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm37782-201ENSMUST00000194879 678 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm43249-201ENSMUST00000200464 458 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 BC080696-201ENSMUST00000202858 1218 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm45094-201ENSMUST00000207013 617 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gm25580-201ENSMUST00000083409 327 ntBASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps53Q8CCB4 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms