Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Lsm3P62311 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lsm3P62311 Gm12830-201ENSMUST00000137570 2306 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Lsm3P62311 Ptk2-209ENSMUST00000226988 4444 ntAPPRIS ALT1 BASIC9.51□□□□□ -0.89
Lsm3P62311 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.51□□□□□ -0.89
Lsm3P62311 Inpp4b-212ENSMUST00000215332 5486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 Washc4-201ENSMUST00000038388 5858 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm3P62311 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm3P62311 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm3P62311 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm3P62311 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm3P62311 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Lsm3P62311 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.51□□□□□ -0.89
Lsm3P62311 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.51□□□□□ -0.89
Lsm3P62311 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.51□□□□□ -0.89
Lsm3P62311 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.51□□□□□ -0.89
Lsm3P62311 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 Gm2991-201ENSMUST00000173338 480 ntBASIC9.51□□□□□ -0.89
Lsm3P62311 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.51□□□□□ -0.89
Lsm3P62311 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Platr10-202ENSMUST00000191479 818 ntBASIC9.51□□□□□ -0.89
Lsm3P62311 Gm6621-201ENSMUST00000193251 772 ntBASIC9.51□□□□□ -0.89
Lsm3P62311 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Lsm3P62311 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.51□□□□□ -0.89
Lsm3P62311 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 Limk2-202ENSMUST00000101640 3711 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.51□□□□□ -0.89
Lsm3P62311 Gm43795-201ENSMUST00000202051 2366 ntBASIC9.51□□□□□ -0.89
Lsm3P62311 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Lsm3P62311 Hdac7-206ENSMUST00000119670 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Lsm3P62311 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Cdca2-205ENSMUST00000150006 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Lsm3P62311 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Gm13498-201ENSMUST00000119159 2166 ntBASIC9.5□□□□□ -0.89
Lsm3P62311 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Bcas3-206ENSMUST00000108062 3724 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.5□□□□□ -0.89
Lsm3P62311 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.5□□□□□ -0.89
Lsm3P62311 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.5□□□□□ -0.89
Lsm3P62311 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Gm28071-201ENSMUST00000190355 478 ntBASIC9.5□□□□□ -0.89
Lsm3P62311 Gm37284-201ENSMUST00000193607 539 ntBASIC9.5□□□□□ -0.89
Lsm3P62311 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.5□□□□□ -0.89
Lsm3P62311 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.5□□□□□ -0.89
Lsm3P62311 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.5□□□□□ -0.89
Lsm3P62311 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.5□□□□□ -0.89
Lsm3P62311 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Arhgap19-201ENSMUST00000026150 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Lsm3P62311 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms