Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Gm38368-201ENSMUST00000193181 1335 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 AA623943-201ENSMUST00000121794 354 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Olfml3-204ENSMUST00000169286 874 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Snord55-201ENSMUST00000174939 79 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.79□□□□□ -0.36
LtbrP50284 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Gm26943-201ENSMUST00000182295 957 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Gm44420-201ENSMUST00000203669 490 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Gm44917-201ENSMUST00000208798 520 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Gm18164-201ENSMUST00000213769 927 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Gm18166-201ENSMUST00000215557 927 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
LtbrP50284 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LtbrP50284 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LtbrP50284 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LtbrP50284 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.79□□□□□ -0.36
LtbrP50284 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LtbrP50284 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LtbrP50284 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LtbrP50284 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.78□□□□□ -0.36
LtbrP50284 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LtbrP50284 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LtbrP50284 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
LtbrP50284 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.78□□□□□ -0.36
LtbrP50284 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LtbrP50284 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LtbrP50284 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.78□□□□□ -0.36
LtbrP50284 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC12.78□□□□□ -0.36
LtbrP50284 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LtbrP50284 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Mir598-201ENSMUST00000102094 79 ntBASIC12.78□□□□□ -0.36
LtbrP50284 Gm23062-201ENSMUST00000102349 110 ntBASIC12.78□□□□□ -0.36
LtbrP50284 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LtbrP50284 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms