Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.16□□□□□ -0.46
Vcam1P29533 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Vcam1P29533 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Gm24981-201ENSMUST00000104459 132 ntBASIC12.15□□□□□ -0.46
Vcam1P29533 Gm13303-201ENSMUST00000117125 1284 ntBASIC12.15□□□□□ -0.46
Vcam1P29533 Gm12254-201ENSMUST00000134617 471 ntBASIC12.15□□□□□ -0.46
Vcam1P29533 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vcam1P29533 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC12.15□□□□□ -0.46
Vcam1P29533 Gm6644-201ENSMUST00000186507 951 ntBASIC12.15□□□□□ -0.46
Vcam1P29533 Gm29487-201ENSMUST00000190146 256 ntBASIC12.15□□□□□ -0.46
Vcam1P29533 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC12.15□□□□□ -0.46
Vcam1P29533 AC130217.1-201ENSMUST00000224146 909 ntBASIC12.15□□□□□ -0.46
Vcam1P29533 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Gm8991-201ENSMUST00000073014 1075 ntBASIC12.15□□□□□ -0.46
Vcam1P29533 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vcam1P29533 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.15□□□□□ -0.46
Vcam1P29533 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vcam1P29533 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vcam1P29533 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Vcam1P29533 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vcam1P29533 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.14□□□□□ -0.47
Vcam1P29533 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vcam1P29533 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vcam1P29533 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Vcam1P29533 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Gm23061-201ENSMUST00000102348 116 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Gm25561-201ENSMUST00000104607 125 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC12.14□□□□□ -0.47
Vcam1P29533 Gm8707-201ENSMUST00000183325 980 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Mir7088-201ENSMUST00000184227 86 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Mir6360-201ENSMUST00000184278 126 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC12.14□□□□□ -0.47
Vcam1P29533 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Vcam1P29533 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC12.14□□□□□ -0.47
Vcam1P29533 Gm43117-201ENSMUST00000198531 379 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Gm42687-201ENSMUST00000199075 164 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Gm3889-201ENSMUST00000212467 612 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vcam1P29533 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.14□□□□□ -0.47
Vcam1P29533 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vcam1P29533 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm8968-201ENSMUST00000199133 1303 ntBASIC12.13□□□□□ -0.47
Vcam1P29533 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vcam1P29533 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms