Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm26670-201ENSMUST00000180429 3287 ntBASIC7.7□□□□□ -1.18
TcraP01849 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Stk36-202ENSMUST00000087186 4065 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
TcraP01849 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC7.69□□□□□ -1.18
TcraP01849 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
TcraP01849 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC7.69□□□□□ -1.18
TcraP01849 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
TcraP01849 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 5430416N02Rik-201ENSMUST00000180779 3486 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
TcraP01849 Gm24891-201ENSMUST00000104391 136 ntBASIC7.69□□□□□ -1.18
TcraP01849 Mir877-201ENSMUST00000104738 85 ntBASIC7.69□□□□□ -1.18
TcraP01849 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
TcraP01849 Gm14724-201ENSMUST00000118400 537 ntBASIC7.69□□□□□ -1.18
TcraP01849 Gm12749-201ENSMUST00000122138 1159 ntBASIC7.69□□□□□ -1.18
TcraP01849 Gm24990-201ENSMUST00000157406 323 ntBASIC7.69□□□□□ -1.18
TcraP01849 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
TcraP01849 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Gm10807-201ENSMUST00000177134 795 ntBASIC7.69□□□□□ -1.18
TcraP01849 Gm8100-201ENSMUST00000182906 988 ntBASIC7.69□□□□□ -1.18
TcraP01849 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC7.69□□□□□ -1.18
TcraP01849 Gm5714-201ENSMUST00000197343 566 ntBASIC7.69□□□□□ -1.18
TcraP01849 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
TcraP01849 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
TcraP01849 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
TcraP01849 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC7.69□□□□□ -1.18
TcraP01849 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Wnk4-201ENSMUST00000103108 4117 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 AC154220.1-201ENSMUST00000225033 1705 ntBASIC7.69□□□□□ -1.18
TcraP01849 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
TcraP01849 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
TcraP01849 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
TcraP01849 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
TcraP01849 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
TcraP01849 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
TcraP01849 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Gm14592-201ENSMUST00000117201 560 ntBASIC7.68□□□□□ -1.18
TcraP01849 Gm12247-201ENSMUST00000117585 670 ntBASIC7.68□□□□□ -1.18
TcraP01849 Gm8566-201ENSMUST00000120174 465 ntBASIC7.68□□□□□ -1.18
TcraP01849 Gm14017-201ENSMUST00000121934 386 ntBASIC7.68□□□□□ -1.18
TcraP01849 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC7.68□□□□□ -1.18
TcraP01849 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC7.68□□□□□ -1.18
TcraP01849 Cd63-ps-202ENSMUST00000154992 717 ntBASIC7.68□□□□□ -1.18
TcraP01849 Gm23085-201ENSMUST00000157849 293 ntBASIC7.68□□□□□ -1.18
TcraP01849 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
TcraP01849 Gm37666-201ENSMUST00000194110 866 ntBASIC7.68□□□□□ -1.18
TcraP01849 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC7.68□□□□□ -1.18
TcraP01849 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC7.68□□□□□ -1.18
TcraP01849 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
TcraP01849 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Gm21027-201ENSMUST00000219300 1236 ntBASIC7.68□□□□□ -1.18
TcraP01849 AC134860.1-201ENSMUST00000224867 660 ntBASIC7.68□□□□□ -1.18
TcraP01849 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Gm21811-201ENSMUST00000096485 930 ntBASIC7.68□□□□□ -1.18
TcraP01849 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Rassf5-202ENSMUST00000068564 3076 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TcraP01849 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC7.68□□□□□ -1.18
TcraP01849 Mid1-205ENSMUST00000112105 3974 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms