Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Gm17070-201ENSMUST00000170463 784 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Gm9162-201ENSMUST00000182081 991 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Gm7583-201ENSMUST00000182941 1005 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Gm45308-201ENSMUST00000210610 415 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 AC149294.3-201ENSMUST00000226888 732 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Upk3aQ9JKX8 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm14231-201ENSMUST00000120090 592 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm12783-201ENSMUST00000121425 397 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm23081-201ENSMUST00000157845 297 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm17214-201ENSMUST00000164501 541 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Upk3aQ9JKX8 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Upk3aQ9JKX8 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms