Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm15264-201ENSMUST00000118050 502 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm5764-201ENSMUST00000118817 885 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm9162-201ENSMUST00000182081 991 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm34379-201ENSMUST00000195036 290 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm5865-201ENSMUST00000198713 637 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm42859-201ENSMUST00000199572 193 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp2aQ9DB34 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Gm11919-201ENSMUST00000117609 721 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Mir1896-201ENSMUST00000122641 81 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Gm24312-201ENSMUST00000178677 119 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms