Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 AC131029.1-201ENSMUST00000226391 2929 ntBASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm26013-201ENSMUST00000104404 119 ntBASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm13117-201ENSMUST00000120894 691 ntBASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Mir8091-201ENSMUST00000183602 139 ntBASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm33080-201ENSMUST00000205429 172 ntBASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp4cQ9D7F7 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Chmp4cQ9D7F7 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm37567-201ENSMUST00000193241 2279 ntBASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm11411-201ENSMUST00000117951 719 ntBASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Gm21817-201ENSMUST00000178584 2583 ntBASIC12.64□□□□□ -0.39
Chmp4cQ9D7F7 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms