Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm9619-201ENSMUST00000211587 762 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 AC117769.1-201ENSMUST00000224716 1120 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 AC134913.2-201ENSMUST00000225017 771 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 AC102523.1-201ENSMUST00000228706 1144 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.38□□□□□ -0.91
Scrt1Q99M85 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Scrt1Q99M85 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Ighv13-1-201ENSMUST00000103480 294 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Defa-ps17-201ENSMUST00000121849 171 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm22388-201ENSMUST00000158194 248 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm28671-201ENSMUST00000187036 692 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm8226-201ENSMUST00000190511 798 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm7445-201ENSMUST00000192115 340 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 AC154477.1-201ENSMUST00000226515 773 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 AC137842.2-201ENSMUST00000227734 797 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 AC107711.4-201ENSMUST00000228948 440 ntBASIC9.37□□□□□ -0.91
Scrt1Q99M85 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Scrt1Q99M85 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm6441-201ENSMUST00000120983 696 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm25394-201ENSMUST00000157338 133 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms