Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Gm44498-201ENSMUST00000199509 111 ntBASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Gm19566-201ENSMUST00000199576 610 ntBASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 AC126459.1-201ENSMUST00000214791 2123 ntBASIC10.92□□□□□ -0.66
Trub1Q8C0D0 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trub1Q8C0D0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm7052-201ENSMUST00000167568 1512 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm11560-201ENSMUST00000117567 948 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm11919-201ENSMUST00000117609 721 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm12745-201ENSMUST00000121767 214 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm19587-201ENSMUST00000191395 545 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm8625-201ENSMUST00000194185 1077 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm29787-201ENSMUST00000222129 849 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trub1Q8C0D0 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm14006-201ENSMUST00000122132 981 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm4903-201ENSMUST00000210462 405 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trub1Q8C0D0 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms