Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm42859-201ENSMUST00000199572 193 ntBASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm8181-201ENSMUST00000062242 669 ntBASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Casc4Q6P2L7 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gm16518-201ENSMUST00000117960 508 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gm20392-201ENSMUST00000173047 701 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gm18014-201ENSMUST00000183369 817 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gm19587-201ENSMUST00000191395 545 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gm18466-201ENSMUST00000209147 499 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Casc4Q6P2L7 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Casc4Q6P2L7 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Casc4Q6P2L7 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Casc4Q6P2L7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Casc4Q6P2L7 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Casc4Q6P2L7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Casc4Q6P2L7 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Casc4Q6P2L7 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Casc4Q6P2L7 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms