Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm29543-201ENSMUST00000188138 967 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm18555-201ENSMUST00000197935 584 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm3527-201ENSMUST00000198905 460 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm42710-201ENSMUST00000200608 985 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm44607-201ENSMUST00000205611 1090 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm19189-201ENSMUST00000221689 754 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm14579-201ENSMUST00000117068 283 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm13094-201ENSMUST00000117930 409 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm12337-201ENSMUST00000119634 400 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm5254-201ENSMUST00000188353 977 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm42803-201ENSMUST00000201051 451 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm45893-201ENSMUST00000211899 247 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rc3h1Q4VGL6 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h1Q4VGL6 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms