Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.84□□□□□ -0.67
Ebf1Q07802 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ebf1Q07802 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ebf1Q07802 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.83□□□□□ -0.68
Ebf1Q07802 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Mir744-201ENSMUST00000103261 100 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.83□□□□□ -0.68
Ebf1Q07802 Gm12106-201ENSMUST00000116006 1200 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.83□□□□□ -0.68
Ebf1Q07802 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.83□□□□□ -0.68
Ebf1Q07802 Gm24294-201ENSMUST00000158295 277 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Mir8111-201ENSMUST00000184463 137 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.83□□□□□ -0.68
Ebf1Q07802 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Ebf1Q07802 Gm18555-201ENSMUST00000197935 584 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Ebf1Q07802 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.83□□□□□ -0.68
Ebf1Q07802 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ebf1Q07802 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.83□□□□□ -0.68
Ebf1Q07802 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.83□□□□□ -0.68
Ebf1Q07802 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.83□□□□□ -0.68
Ebf1Q07802 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ebf1Q07802 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ebf1Q07802 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm14592-201ENSMUST00000117201 560 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm14034-201ENSMUST00000120147 551 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Mir6359-201ENSMUST00000183668 81 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm5254-201ENSMUST00000188353 977 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms