Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ybx1P62960 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.92□□□□□ -0.66
Ybx1P62960 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ybx1P62960 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ybx1P62960 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.92□□□□□ -0.66
Ybx1P62960 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ybx1P62960 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ybx1P62960 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.92□□□□□ -0.66
Ybx1P62960 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ybx1P62960 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ybx1P62960 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.92□□□□□ -0.66
Ybx1P62960 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Ybx1P62960 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Gm38034-201ENSMUST00000193915 2069 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ybx1P62960 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Gm15636-201ENSMUST00000119205 668 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.91□□□□□ -0.66
Ybx1P62960 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC10.91□□□□□ -0.66
Ybx1P62960 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Gm25591-201ENSMUST00000177317 94 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Gm29304-201ENSMUST00000186555 695 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Ybx1P62960 Gm29223-201ENSMUST00000188867 695 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Gm37921-201ENSMUST00000194333 695 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.91□□□□□ -0.66
Ybx1P62960 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Ybx1P62960 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ybx1P62960 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.9□□□□□ -0.66
Ybx1P62960 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.9□□□□□ -0.66
Ybx1P62960 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Gm13281-201ENSMUST00000120871 567 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.9□□□□□ -0.66
Ybx1P62960 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Gm9515-201ENSMUST00000200276 647 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.9□□□□□ -0.66
Ybx1P62960 AC163638.2-201ENSMUST00000224920 827 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 AC118639.1-202ENSMUST00000226957 653 ntBASIC10.9□□□□□ -0.66
Ybx1P62960 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ybx1P62960 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ybx1P62960 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms