Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.82□□□□□ -0.36
LtbrP50284 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.82□□□□□ -0.36
LtbrP50284 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Gm5040-201ENSMUST00000218609 800 ntBASIC12.82□□□□□ -0.36
LtbrP50284 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LtbrP50284 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.82□□□□□ -0.36
LtbrP50284 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LtbrP50284 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LtbrP50284 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LtbrP50284 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.81□□□□□ -0.36
LtbrP50284 Gm15741-201ENSMUST00000119401 754 ntBASIC12.81□□□□□ -0.36
LtbrP50284 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC12.81□□□□□ -0.36
LtbrP50284 Gm14176-201ENSMUST00000121302 477 ntBASIC12.81□□□□□ -0.36
LtbrP50284 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.81□□□□□ -0.36
LtbrP50284 Gm6098-201ENSMUST00000180234 330 ntBASIC12.81□□□□□ -0.36
LtbrP50284 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Gm42710-201ENSMUST00000200608 985 ntBASIC12.81□□□□□ -0.36
LtbrP50284 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LtbrP50284 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LtbrP50284 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LtbrP50284 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LtbrP50284 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LtbrP50284 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LtbrP50284 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.81□□□□□ -0.36
LtbrP50284 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LtbrP50284 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LtbrP50284 Gm45177-201ENSMUST00000209104 2307 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LtbrP50284 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LtbrP50284 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Gm11380-201ENSMUST00000118067 560 ntBASIC12.8□□□□□ -0.36
LtbrP50284 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Gm19246-201ENSMUST00000173599 255 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
LtbrP50284 Gm19214-201ENSMUST00000191956 1083 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Gm43596-201ENSMUST00000202818 884 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Gm44008-201ENSMUST00000204345 412 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Gm5738-201ENSMUST00000206016 779 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.8□□□□□ -0.36
LtbrP50284 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.8□□□□□ -0.36
LtbrP50284 Gm46436-201ENSMUST00000221851 1294 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.8□□□□□ -0.36
LtbrP50284 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LtbrP50284 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LtbrP50284 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.8□□□□□ -0.36
LtbrP50284 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms