Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC8.53□□□□□ -1.04
P01727 Gm6441-201ENSMUST00000120983 696 ntBASIC8.53□□□□□ -1.04
P01727 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
P01727 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC8.53□□□□□ -1.04
P01727 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC8.53□□□□□ -1.04
P01727 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC8.53□□□□□ -1.04
P01727 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC8.53□□□□□ -1.04
P01727 Gm6677-201ENSMUST00000195100 441 ntBASIC8.53□□□□□ -1.04
P01727 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC8.53□□□□□ -1.04
P01727 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC8.53□□□□□ -1.04
P01727 Gm42588-201ENSMUST00000200538 1297 ntBASIC8.53□□□□□ -1.04
P01727 CT009713.2-201ENSMUST00000225532 1149 ntBASIC8.53□□□□□ -1.04
P01727 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
P01727 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Gm29245-201ENSMUST00000187332 1416 ntBASIC8.53□□□□□ -1.04
P01727 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.53□□□□□ -1.04
P01727 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
P01727 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
P01727 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
P01727 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
P01727 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
P01727 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
P01727 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
P01727 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
P01727 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
P01727 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
P01727 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
P01727 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC8.52□□□□□ -1.05
P01727 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 AC122881.1-201ENSMUST00000225757 2695 ntBASIC8.52□□□□□ -1.05
P01727 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Gm6170-201ENSMUST00000187672 1388 ntBASIC8.52□□□□□ -1.05
P01727 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
P01727 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
P01727 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC8.52□□□□□ -1.05
P01727 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
P01727 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC8.52□□□□□ -1.05
P01727 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC8.52□□□□□ -1.05
P01727 Gm16518-201ENSMUST00000117960 508 ntBASIC8.52□□□□□ -1.05
P01727 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC8.52□□□□□ -1.05
P01727 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC8.52□□□□□ -1.05
P01727 Gm13857-201ENSMUST00000139645 173 ntBASIC8.52□□□□□ -1.05
P01727 Gm26313-201ENSMUST00000157770 308 ntBASIC8.52□□□□□ -1.05
P01727 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
P01727 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Gm7572-201ENSMUST00000182616 766 ntBASIC8.52□□□□□ -1.05
P01727 Mir6953-201ENSMUST00000184745 68 ntBASIC8.52□□□□□ -1.05
P01727 Gm17796-201ENSMUST00000189015 1213 ntBASIC8.52□□□□□ -1.05
P01727 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Gm6439-201ENSMUST00000199849 862 ntBASIC8.52□□□□□ -1.05
P01727 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Gm6331-201ENSMUST00000217890 450 ntBASIC8.52□□□□□ -1.05
P01727 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
P01727 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
P01727 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
P01727 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms