Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.27□□□□□ -0.61
Itgb3O54890 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Itgb3O54890 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Itgb3O54890 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Itgb3O54890 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Itgb3O54890 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Gm22594-201ENSMUST00000104251 130 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.26□□□□□ -0.61
Itgb3O54890 Gm11411-201ENSMUST00000117951 719 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Gm6441-201ENSMUST00000120983 696 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Gm25226-201ENSMUST00000158198 123 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Gm7928-201ENSMUST00000181249 701 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Itgb3O54890 Gm43547-201ENSMUST00000197729 328 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.26□□□□□ -0.61
Itgb3O54890 Gm18010-201ENSMUST00000203553 202 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Itgb3O54890 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 AC101205.2-201ENSMUST00000226206 715 ntBASIC11.26□□□□□ -0.61
Itgb3O54890 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Itgb3O54890 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Itgb3O54890 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Itgb3O54890 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Itgb3O54890 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.26□□□□□ -0.61
Itgb3O54890 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Itgb3O54890 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Itgb3O54890 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Itgb3O54890 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.25□□□□□ -0.61
Itgb3O54890 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm25872-201ENSMUST00000177784 100 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Gm6686-201ENSMUST00000178455 258 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Gm8601-201ENSMUST00000182096 909 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm27316-201ENSMUST00000184884 277 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm42780-201ENSMUST00000197083 734 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Wbp1-209ENSMUST00000205023 716 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.25□□□□□ -0.61
Itgb3O54890 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.25□□□□□ -0.61
Itgb3O54890 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.25□□□□□ -0.61
Itgb3O54890 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Itgb3O54890 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms