Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm11952-201ENSMUST00000121172 821 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm10169-201ENSMUST00000121822 348 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm25226-201ENSMUST00000158198 123 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm26134-201ENSMUST00000178484 110 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm37597-201ENSMUST00000191853 382 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm43275-201ENSMUST00000202053 1020 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm16380-201ENSMUST00000077997 478 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Rims2-204ENSMUST00000226410 3685 ntBASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm37048-201ENSMUST00000194827 5578 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm15264-201ENSMUST00000118050 502 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm3828-201ENSMUST00000121817 257 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm37852-201ENSMUST00000193027 350 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm38321-201ENSMUST00000195053 235 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm42859-201ENSMUST00000199572 193 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm18165-201ENSMUST00000217426 928 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.59□□□□□ -0.87
Sec61a2Q9JLR1 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms