Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.22□□□□□ -0.61
Nod1Q8BHB0 AC154197.1-201ENSMUST00000225136 1382 ntBASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.22□□□□□ -0.61
Nod1Q8BHB0 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm23604-201ENSMUST00000104311 132 ntBASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm6939-201ENSMUST00000122029 864 ntBASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm8707-201ENSMUST00000183325 980 ntBASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm37597-201ENSMUST00000191853 382 ntBASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm42710-201ENSMUST00000200608 985 ntBASIC11.21□□□□□ -0.61
Nod1Q8BHB0 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nod1Q8BHB0 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.21□□□□□ -0.62
Nod1Q8BHB0 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.21□□□□□ -0.62
Nod1Q8BHB0 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.21□□□□□ -0.62
Nod1Q8BHB0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.21□□□□□ -0.62
Nod1Q8BHB0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nod1Q8BHB0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nod1Q8BHB0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Nod1Q8BHB0 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nod1Q8BHB0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.21□□□□□ -0.62
Nod1Q8BHB0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm12397-201ENSMUST00000117674 615 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm14997-201ENSMUST00000119232 636 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm14231-201ENSMUST00000120090 592 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm14176-201ENSMUST00000121302 477 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm14148-201ENSMUST00000122433 1008 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm16305-201ENSMUST00000140747 556 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Gm22662-201ENSMUST00000175290 256 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.2□□□□□ -0.62
Nod1Q8BHB0 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms