Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm11979-201ENSMUST00000119629 743 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm11824-201ENSMUST00000120191 846 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm6441-201ENSMUST00000120983 696 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm25951-201ENSMUST00000175330 64 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm27956-201ENSMUST00000175604 260 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm26943-201ENSMUST00000182295 957 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm18123-201ENSMUST00000210874 822 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm18122-201ENSMUST00000211390 904 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm9619-201ENSMUST00000211587 762 ntBASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps54Q5SPW0 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm42974-201ENSMUST00000199556 2654 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm8216-201ENSMUST00000117232 601 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm13688-201ENSMUST00000121557 608 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm29543-201ENSMUST00000188138 967 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm8022-201ENSMUST00000191763 904 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm6855-201ENSMUST00000206307 790 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm32111-201ENSMUST00000207689 846 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm5189-201ENSMUST00000221796 261 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 AC164883.7-201ENSMUST00000228534 851 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps54Q5SPW0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms