Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC10.81□□□□□ -0.68
Vgll3P85442 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vgll3P85442 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vgll3P85442 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Vgll3P85442 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.81□□□□□ -0.68
Vgll3P85442 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.81□□□□□ -0.68
Vgll3P85442 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.81□□□□□ -0.68
Vgll3P85442 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.81□□□□□ -0.68
Vgll3P85442 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.81□□□□□ -0.68
Vgll3P85442 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.81□□□□□ -0.68
Vgll3P85442 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.81□□□□□ -0.68
Vgll3P85442 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.81□□□□□ -0.68
Vgll3P85442 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vgll3P85442 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 AC164437.4-202ENSMUST00000228794 2413 ntBASIC10.81□□□□□ -0.68
Vgll3P85442 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.81□□□□□ -0.68
Vgll3P85442 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.81□□□□□ -0.68
Vgll3P85442 Gm16023-201ENSMUST00000137752 2490 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Aldh18a1-201ENSMUST00000025979 3527 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Pitrm1-201ENSMUST00000021611 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.81□□□□□ -0.68
Vgll3P85442 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vgll3P85442 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Kprp-201ENSMUST00000072363 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.8□□□□□ -0.68
Vgll3P85442 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm17816-201ENSMUST00000219991 2603 ntBASIC10.8□□□□□ -0.68
Vgll3P85442 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Vgll3P85442 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Mir1247-201ENSMUST00000116706 82 ntBASIC10.8□□□□□ -0.68
Vgll3P85442 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.8□□□□□ -0.68
Vgll3P85442 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.8□□□□□ -0.68
Vgll3P85442 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.8□□□□□ -0.68
Vgll3P85442 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.8□□□□□ -0.68
Vgll3P85442 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.8□□□□□ -0.68
Vgll3P85442 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm37008-201ENSMUST00000195712 319 ntBASIC10.8□□□□□ -0.68
Vgll3P85442 Gm45880-201ENSMUST00000213041 853 ntBASIC10.8□□□□□ -0.68
Vgll3P85442 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.8□□□□□ -0.68
Vgll3P85442 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Rrn3-201ENSMUST00000023363 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Stam2-201ENSMUST00000102759 4717 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Zcchc12-204ENSMUST00000115258 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm18640-201ENSMUST00000209777 2165 ntBASIC10.8□□□□□ -0.68
Vgll3P85442 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Zc3hav1-204ENSMUST00000143702 3364 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Vgll3P85442 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Vgll3P85442 Gm29427-201ENSMUST00000188520 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vgll3P85442 Wdcp-206ENSMUST00000223551 4317 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Vgll3P85442 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vgll3P85442 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vgll3P85442 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vgll3P85442 Alox15-201ENSMUST00000019068 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vgll3P85442 Oas1c-201ENSMUST00000117193 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vgll3P85442 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vgll3P85442 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.79□□□□□ -0.68
Vgll3P85442 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Vgll3P85442 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Vgll3P85442 Vill-201ENSMUST00000051386 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms