Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm5599-201ENSMUST00000209602 788 ntBASIC9.23□□□□□ -0.93
UbbP0CG49 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
UbbP0CG49 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
UbbP0CG49 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
UbbP0CG49 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.23□□□□□ -0.93
UbbP0CG49 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.23□□□□□ -0.93
UbbP0CG49 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
UbbP0CG49 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
UbbP0CG49 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
UbbP0CG49 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.22□□□□□ -0.93
UbbP0CG49 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
UbbP0CG49 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
UbbP0CG49 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Gm7857-201ENSMUST00000117957 358 ntBASIC9.22□□□□□ -0.93
UbbP0CG49 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.22□□□□□ -0.93
UbbP0CG49 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Gm5186-201ENSMUST00000218781 920 ntBASIC9.22□□□□□ -0.93
UbbP0CG49 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.22□□□□□ -0.93
UbbP0CG49 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.22□□□□□ -0.93
UbbP0CG49 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.22□□□□□ -0.93
UbbP0CG49 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
UbbP0CG49 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.22□□□□□ -0.93
UbbP0CG49 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.21□□□□□ -0.93
UbbP0CG49 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.21□□□□□ -0.93
UbbP0CG49 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.21□□□□□ -0.93
UbbP0CG49 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.21□□□□□ -0.93
UbbP0CG49 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.21□□□□□ -0.93
UbbP0CG49 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
UbbP0CG49 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
UbbP0CG49 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.21□□□□□ -0.94
UbbP0CG49 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
UbbP0CG49 Gm2383-201ENSMUST00000181461 807 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 Gm27341-201ENSMUST00000183570 106 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.21□□□□□ -0.94
UbbP0CG49 Gm37905-201ENSMUST00000195310 341 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 Gm37826-201ENSMUST00000195329 322 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.21□□□□□ -0.94
UbbP0CG49 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
UbbP0CG49 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 Gm8162-201ENSMUST00000213951 665 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.21□□□□□ -0.94
UbbP0CG49 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
UbbP0CG49 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms