Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf6F6VAN0 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf6F6VAN0 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf6F6VAN0 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf6F6VAN0 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm25562-201ENSMUST00000104608 133 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm25063-201ENSMUST00000104666 94 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm6425-201ENSMUST00000136332 790 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm29410-201ENSMUST00000188383 694 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm7082-201ENSMUST00000209880 969 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 Gm17917-201ENSMUST00000218561 953 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.96□□□□□ -0.65
Atf6F6VAN0 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.96□□□□□ -0.65
Atf6F6VAN0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf6F6VAN0 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Atf6F6VAN0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Gm11411-201ENSMUST00000117951 719 ntBASIC10.95□□□□□ -0.66
Atf6F6VAN0 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.95□□□□□ -0.66
Atf6F6VAN0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Mir6998-201ENSMUST00000183343 64 ntBASIC10.95□□□□□ -0.66
Atf6F6VAN0 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.95□□□□□ -0.66
Atf6F6VAN0 Capsl-202ENSMUST00000226688 739 ntBASIC10.95□□□□□ -0.66
Atf6F6VAN0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Atf6F6VAN0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Atf6F6VAN0 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.94□□□□□ -0.66
Atf6F6VAN0 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Atf6F6VAN0 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.94□□□□□ -0.66
Atf6F6VAN0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Atf6F6VAN0 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Atf6F6VAN0 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms