Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.79□□□□□ -0.52
Brpf3B2KF05 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.79□□□□□ -0.52
Brpf3B2KF05 Gm43671-201ENSMUST00000200422 433 ntBASIC11.79□□□□□ -0.52
Brpf3B2KF05 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.79□□□□□ -0.52
Brpf3B2KF05 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.79□□□□□ -0.52
Brpf3B2KF05 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.79□□□□□ -0.52
Brpf3B2KF05 Gm5451-201ENSMUST00000080545 579 ntBASIC11.79□□□□□ -0.52
Brpf3B2KF05 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.79□□□□□ -0.52
Brpf3B2KF05 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brpf3B2KF05 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm15352-201ENSMUST00000118696 270 ntBASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm13740-201ENSMUST00000120590 310 ntBASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm4654-201ENSMUST00000183305 982 ntBASIC11.78□□□□□ -0.52
Brpf3B2KF05 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm42780-201ENSMUST00000197083 734 ntBASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm6905-201ENSMUST00000205729 511 ntBASIC11.78□□□□□ -0.52
Brpf3B2KF05 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.78□□□□□ -0.52
Brpf3B2KF05 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.78□□□□□ -0.52
Brpf3B2KF05 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brpf3B2KF05 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Brpf3B2KF05 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gm23200-201ENSMUST00000104379 132 ntBASIC11.77□□□□□ -0.53
Brpf3B2KF05 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brpf3B2KF05 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gm7583-201ENSMUST00000182941 1005 ntBASIC11.77□□□□□ -0.53
Brpf3B2KF05 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.77□□□□□ -0.53
Brpf3B2KF05 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brpf3B2KF05 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Brpf3B2KF05 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms