Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc4Q3UP44 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm13022-201ENSMUST00000121181 285 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm11354-201ENSMUST00000121974 422 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm14006-201ENSMUST00000122132 981 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm23218-201ENSMUST00000158124 276 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm22877-201ENSMUST00000175451 105 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm26272-201ENSMUST00000179241 132 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm37020-201ENSMUST00000195303 992 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm44640-201ENSMUST00000206894 247 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm18463-201ENSMUST00000207258 474 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm18460-201ENSMUST00000208088 464 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 AC155300.1-201ENSMUST00000219134 480 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm7959-201ENSMUST00000221823 1078 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Atf7-201ENSMUST00000096143 390 ntBASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nhlrc4Q3UP44 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm37583-201ENSMUST00000195460 2487 ntBASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm11675-201ENSMUST00000121873 832 ntBASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm22344-201ENSMUST00000122642 278 ntBASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm22146-201ENSMUST00000157397 288 ntBASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.75□□□□□ -0.85
Nhlrc4Q3UP44 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms