Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm5311-201ENSMUST00000203518 709 ntBASIC12.08□□□□□ -0.48
GabpaQ00422 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.08□□□□□ -0.48
GabpaQ00422 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
GabpaQ00422 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
GabpaQ00422 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.08□□□□□ -0.48
GabpaQ00422 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
GabpaQ00422 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
GabpaQ00422 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.07□□□□□ -0.48
GabpaQ00422 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
GabpaQ00422 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.07□□□□□ -0.48
GabpaQ00422 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
GabpaQ00422 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
GabpaQ00422 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
GabpaQ00422 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.07□□□□□ -0.48
GabpaQ00422 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
GabpaQ00422 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.07□□□□□ -0.48
GabpaQ00422 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.07□□□□□ -0.48
GabpaQ00422 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.07□□□□□ -0.48
GabpaQ00422 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC12.07□□□□□ -0.48
GabpaQ00422 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.07□□□□□ -0.48
GabpaQ00422 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.07□□□□□ -0.48
GabpaQ00422 Gm44388-201ENSMUST00000204350 258 ntBASIC12.07□□□□□ -0.48
GabpaQ00422 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.07□□□□□ -0.48
GabpaQ00422 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.07□□□□□ -0.48
GabpaQ00422 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
GabpaQ00422 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.07□□□□□ -0.48
GabpaQ00422 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.07□□□□□ -0.48
GabpaQ00422 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
GabpaQ00422 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
GabpaQ00422 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
GabpaQ00422 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GabpaQ00422 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
GabpaQ00422 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GabpaQ00422 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
GabpaQ00422 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.06□□□□□ -0.48
GabpaQ00422 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GabpaQ00422 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
GabpaQ00422 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Gm4943-201ENSMUST00000132879 424 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.06□□□□□ -0.48
GabpaQ00422 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
GabpaQ00422 Gm38321-201ENSMUST00000195053 235 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Gm5881-201ENSMUST00000204737 367 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GabpaQ00422 Gm5738-201ENSMUST00000206016 779 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
GabpaQ00422 Gm7242-201ENSMUST00000221134 705 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Klf10-203ENSMUST00000227920 2144 ntBASIC12.06□□□□□ -0.48
GabpaQ00422 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 433 ms