Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm12397-201ENSMUST00000117674 615 ntBASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm13857-201ENSMUST00000139645 173 ntBASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm12906-201ENSMUST00000154610 441 ntBASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 CT025552.1-201ENSMUST00000224561 521 ntBASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.45□□□□□ -0.42
Rc3h1Q4VGL6 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm12948-201ENSMUST00000119406 682 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm6441-201ENSMUST00000120983 696 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm25545-201ENSMUST00000122673 323 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm13827-201ENSMUST00000148801 372 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm26208-201ENSMUST00000158677 124 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Mir8111-201ENSMUST00000184463 137 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm27441-201ENSMUST00000185000 105 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm7902-201ENSMUST00000198842 947 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm18466-201ENSMUST00000209147 499 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm9619-201ENSMUST00000211587 762 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm19640-201ENSMUST00000214849 464 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rc3h1Q4VGL6 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h1Q4VGL6 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms