Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 AA474408-201ENSMUST00000098110 3339 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rph3aP47708 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.38□□□□□ -0.75
Rph3aP47708 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC10.38□□□□□ -0.75
Rph3aP47708 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Rph3aP47708 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm25063-201ENSMUST00000104666 94 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.38□□□□□ -0.75
Rph3aP47708 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm22379-201ENSMUST00000157480 131 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.38□□□□□ -0.75
Rph3aP47708 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm9081-201ENSMUST00000182346 991 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 Gm29410-201ENSMUST00000188383 694 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.38□□□□□ -0.75
Rph3aP47708 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm29787-201ENSMUST00000222129 849 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.38□□□□□ -0.75
Rph3aP47708 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Rph3aP47708 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rph3aP47708 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.38□□□□□ -0.75
Rph3aP47708 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rph3aP47708 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.38□□□□□ -0.75
Rph3aP47708 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rph3aP47708 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rph3aP47708 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rph3aP47708 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm12389-201ENSMUST00000117696 418 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Gm12030-201ENSMUST00000121917 223 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.37□□□□□ -0.75
Rph3aP47708 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.37□□□□□ -0.75
Rph3aP47708 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.37□□□□□ -0.75
Rph3aP47708 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm16030-201ENSMUST00000159098 603 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.37□□□□□ -0.75
Rph3aP47708 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm37852-201ENSMUST00000193027 350 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm42660-201ENSMUST00000197733 947 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Gm43671-201ENSMUST00000200422 433 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm7880-201ENSMUST00000203748 871 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.37□□□□□ -0.75
Rph3aP47708 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.37□□□□□ -0.75
Rph3aP47708 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.37□□□□□ -0.75
Rph3aP47708 Gm7525-201ENSMUST00000219425 454 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms