Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.26□□□□□ -0.93
UbbP0CG49 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
UbbP0CG49 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
UbbP0CG49 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm14028-201ENSMUST00000117434 479 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.26□□□□□ -0.93
UbbP0CG49 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Gm16518-201ENSMUST00000117960 508 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Gm12337-201ENSMUST00000119634 400 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.26□□□□□ -0.93
UbbP0CG49 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm25661-201ENSMUST00000157704 296 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.26□□□□□ -0.93
UbbP0CG49 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm27953-201ENSMUST00000185171 143 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm18466-201ENSMUST00000209147 499 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.26□□□□□ -0.93
UbbP0CG49 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
UbbP0CG49 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.26□□□□□ -0.93
UbbP0CG49 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.26□□□□□ -0.93
UbbP0CG49 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UbbP0CG49 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.25□□□□□ -0.93
UbbP0CG49 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UbbP0CG49 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.25□□□□□ -0.93
UbbP0CG49 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.25□□□□□ -0.93
UbbP0CG49 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UbbP0CG49 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
UbbP0CG49 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.25□□□□□ -0.93
UbbP0CG49 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
UbbP0CG49 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.25□□□□□ -0.93
UbbP0CG49 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.25□□□□□ -0.93
UbbP0CG49 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.25□□□□□ -0.93
UbbP0CG49 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.25□□□□□ -0.93
UbbP0CG49 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC9.25□□□□□ -0.93
UbbP0CG49 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
UbbP0CG49 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
UbbP0CG49 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.25□□□□□ -0.93
UbbP0CG49 Gm44155-201ENSMUST00000203923 412 ntBASIC9.25□□□□□ -0.93
UbbP0CG49 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.25□□□□□ -0.93
UbbP0CG49 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.25□□□□□ -0.93
UbbP0CG49 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UbbP0CG49 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UbbP0CG49 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.25□□□□□ -0.93
UbbP0CG49 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms