Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Gm24992-201ENSMUST00000157412 130 ntBASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Gm28450-201ENSMUST00000187349 638 ntBASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 CT010431.1-201ENSMUST00000221249 1080 ntBASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Ntng1-201ENSMUST00000051253 327 ntBASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trim13Q9CYB0 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.9□□□□□ -0.83
Trim13Q9CYB0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim13Q9CYB0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm12217-201ENSMUST00000118858 696 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm13333-201ENSMUST00000119424 781 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm9089-201ENSMUST00000122027 526 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm25492-201ENSMUST00000157383 129 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm16570-201ENSMUST00000161951 436 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm27552-201ENSMUST00000183351 62 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Gm27844-201ENSMUST00000183613 62 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Olfr584-201ENSMUST00000098210 964 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.89□□□□□ -0.83
Trim13Q9CYB0 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trim13Q9CYB0 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms