Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12□□□□□ -0.49
Smc1aQ9CU62 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Gm19640-201ENSMUST00000214849 464 ntBASIC12□□□□□ -0.49
Smc1aQ9CU62 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12□□□□□ -0.49
Smc1aQ9CU62 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12□□□□□ -0.49
Smc1aQ9CU62 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Gm38192-201ENSMUST00000194364 1847 ntBASIC12□□□□□ -0.49
Smc1aQ9CU62 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smc1aQ9CU62 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Gm8111-201ENSMUST00000117659 987 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Gm7541-201ENSMUST00000118361 535 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smc1aQ9CU62 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm8302-201ENSMUST00000119217 852 ntBASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm12943-201ENSMUST00000119616 210 ntBASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm11354-201ENSMUST00000121974 422 ntBASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm17070-201ENSMUST00000170463 784 ntBASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm44008-201ENSMUST00000204345 412 ntBASIC11.98□□□□□ -0.49
Smc1aQ9CU62 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.98□□□□□ -0.49
Smc1aQ9CU62 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms