Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Scrt1Q99M85 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Mir8091-201ENSMUST00000183602 139 ntBASIC9.44□□□□□ -0.9
Scrt1Q99M85 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.44□□□□□ -0.9
Scrt1Q99M85 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gm10581-201ENSMUST00000097986 231 ntBASIC9.44□□□□□ -0.9
Scrt1Q99M85 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.44□□□□□ -0.9
Scrt1Q99M85 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.44□□□□□ -0.9
Scrt1Q99M85 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Scrt1Q99M85 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm23604-201ENSMUST00000104311 132 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm15746-201ENSMUST00000120684 1027 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm11736-201ENSMUST00000121468 505 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm26174-201ENSMUST00000158415 219 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm20493-201ENSMUST00000173706 213 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm4705-201ENSMUST00000177415 354 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm5808-201ENSMUST00000178090 357 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm27444-201ENSMUST00000184157 137 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm19927-201ENSMUST00000185792 781 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm43726-201ENSMUST00000199110 775 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm43811-201ENSMUST00000202862 695 ntBASIC9.43□□□□□ -0.9
Scrt1Q99M85 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.43□□□□□ -0.9
Scrt1Q99M85 Lect2-202ENSMUST00000225183 823 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms