Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ift88Q61371 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Snord23-201ENSMUST00000116828 109 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 Gm15285-201ENSMUST00000119271 473 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 Gm13019-201ENSMUST00000120000 276 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.76□□□□□ -0.53
Ift88Q61371 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ift88Q61371 Gm37299-201ENSMUST00000193951 826 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.76□□□□□ -0.53
Ift88Q61371 Gm7357-201ENSMUST00000195361 2991 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.76□□□□□ -0.53
Ift88Q61371 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.76□□□□□ -0.53
Ift88Q61371 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ift88Q61371 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ift88Q61371 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.75□□□□□ -0.53
Ift88Q61371 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.75□□□□□ -0.53
Ift88Q61371 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.75□□□□□ -0.53
Ift88Q61371 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.75□□□□□ -0.53
Ift88Q61371 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.75□□□□□ -0.53
Ift88Q61371 Gm25554-201ENSMUST00000158075 113 ntBASIC11.75□□□□□ -0.53
Ift88Q61371 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Gm20392-201ENSMUST00000173047 701 ntBASIC11.75□□□□□ -0.53
Ift88Q61371 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Gm18561-201ENSMUST00000206027 804 ntBASIC11.75□□□□□ -0.53
Ift88Q61371 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.75□□□□□ -0.53
Ift88Q61371 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ift88Q61371 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ift88Q61371 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ift88Q61371 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ift88Q61371 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ift88Q61371 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ift88Q61371 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ift88Q61371 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms