Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm45657-201ENSMUST00000211318 1349 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm24066-201ENSMUST00000104515 131 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm12489-201ENSMUST00000119364 148 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm12254-201ENSMUST00000134617 471 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm23081-201ENSMUST00000157845 297 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm16228-201ENSMUST00000162286 809 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm26532-201ENSMUST00000180630 690 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm38321-201ENSMUST00000195053 235 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm43117-201ENSMUST00000198531 379 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm5881-201ENSMUST00000204737 367 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.42□□□□□ -0.26
Nkx2-3P97334 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-3P97334 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm8848-201ENSMUST00000197270 1343 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Mir744-201ENSMUST00000103261 100 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm13792-201ENSMUST00000121350 423 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm15171-201ENSMUST00000122191 334 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm25394-201ENSMUST00000157338 133 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm20474-201ENSMUST00000180089 596 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm19058-201ENSMUST00000192135 598 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm37629-201ENSMUST00000193635 1050 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm21631-201ENSMUST00000195041 754 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm4866-201ENSMUST00000197408 589 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm17815-201ENSMUST00000198305 895 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm18256-201ENSMUST00000209087 907 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Gm9520-201ENSMUST00000209460 1253 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 AA474408-201ENSMUST00000098110 3339 ntBASIC13.41□□□□□ -0.26
Nkx2-3P97334 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-3P97334 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms