Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.4□□□□□ -0.9
Lsm6P62313 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm42521-201ENSMUST00000199190 2040 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm11411-201ENSMUST00000117951 719 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm15744-201ENSMUST00000161734 213 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Gm9081-201ENSMUST00000182346 991 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm3508-201ENSMUST00000186012 792 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Gm42518-201ENSMUST00000196277 938 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Gm42780-201ENSMUST00000197083 734 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Gm5178-201ENSMUST00000219380 898 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Lsm6P62313 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.4□□□□□ -0.9
Lsm6P62313 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Lsm6P62313 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.4□□□□□ -0.91
Lsm6P62313 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
Lsm6P62313 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Lsm6P62313 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Lsm6P62313 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.4□□□□□ -0.91
Lsm6P62313 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Lsm6P62313 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lsm6P62313 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lsm6P62313 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC9.39□□□□□ -0.91
Lsm6P62313 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Lsm6P62313 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Lsm6P62313 Gm14263-201ENSMUST00000117955 746 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Gm22379-201ENSMUST00000157480 131 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Mir1956-201ENSMUST00000157748 65 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Gm22902-201ENSMUST00000158488 302 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Gm5523-201ENSMUST00000180415 997 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lsm6P62313 Gm18776-201ENSMUST00000188833 654 ntBASIC9.39□□□□□ -0.91
Lsm6P62313 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms