Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC8.92□□□□□ -0.98
Col8a2P25318 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm37723-201ENSMUST00000194480 565 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm17889-201ENSMUST00000198410 598 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm5865-201ENSMUST00000198713 637 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm43778-201ENSMUST00000199438 199 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm44640-201ENSMUST00000206894 247 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm9204-201ENSMUST00000212641 947 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Col8a2P25318 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm4780-202ENSMUST00000215200 2644 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm28624-201ENSMUST00000186430 2131 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Gm44415-201ENSMUST00000204151 2112 ntBASIC8.92□□□□□ -0.98
Col8a2P25318 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col8a2P25318 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC8.92□□□□□ -0.98
Col8a2P25318 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC8.91□□□□□ -0.98
Col8a2P25318 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm42851-201ENSMUST00000201325 1411 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Phtf1os-201ENSMUST00000160110 4046 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC8.91□□□□□ -0.98
Col8a2P25318 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Col8a2P25318 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC8.91□□□□□ -0.98
Col8a2P25318 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm16518-201ENSMUST00000117960 508 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Gm1826-201ENSMUST00000118646 1162 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm26208-201ENSMUST00000158677 124 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm44498-201ENSMUST00000199509 111 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Gm19566-201ENSMUST00000199576 610 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Gm29763-201ENSMUST00000205306 616 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 AC154585.1-201ENSMUST00000218917 997 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 BC106175-202ENSMUST00000219344 1213 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 AC164556.1-201ENSMUST00000221318 751 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 AC138716.2-201ENSMUST00000226670 1016 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 AC121567.1-201ENSMUST00000227213 842 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col8a2P25318 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm45053-201ENSMUST00000206112 2499 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 AC154220.1-201ENSMUST00000225033 1705 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Gm5159-201ENSMUST00000212733 1652 ntBASIC8.91□□□□□ -0.98
Col8a2P25318 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col8a2P25318 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms