Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm3508-201ENSMUST00000186012 792 ntBASIC11.02□□□□□ -0.65
Atf6F6VAN0 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm8365-201ENSMUST00000197334 648 ntBASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Atf6F6VAN0 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm7525-201ENSMUST00000219425 454 ntBASIC11.02□□□□□ -0.65
Atf6F6VAN0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm19009-201ENSMUST00000223072 823 ntBASIC11.02□□□□□ -0.65
Atf6F6VAN0 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm37965-201ENSMUST00000195304 1362 ntBASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.02□□□□□ -0.65
Atf6F6VAN0 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.02□□□□□ -0.65
Atf6F6VAN0 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Atf6F6VAN0 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm9673-201ENSMUST00000119287 781 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm12030-201ENSMUST00000121917 223 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm21147-201ENSMUST00000186046 913 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm18466-201ENSMUST00000209147 499 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm31941-201ENSMUST00000209689 350 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm45657-201ENSMUST00000211318 1349 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Gm42535-201ENSMUST00000197312 1399 ntBASIC11.01□□□□□ -0.65
Atf6F6VAN0 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Atf6F6VAN0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Atf6F6VAN0 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Atf6F6VAN0 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11□□□□□ -0.65
Atf6F6VAN0 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11□□□□□ -0.65
Atf6F6VAN0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11□□□□□ -0.65
Atf6F6VAN0 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms