Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm6881-201ENSMUST00000121811 833 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm23479-201ENSMUST00000158876 122 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm18733-202ENSMUST00000174447 401 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm8601-201ENSMUST00000182096 909 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Gm3379-201ENSMUST00000222259 642 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Syngap1F6SEU4 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm15702-201ENSMUST00000119680 444 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm15570-201ENSMUST00000122093 625 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm26379-201ENSMUST00000178125 138 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm8707-201ENSMUST00000183325 980 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm43103-201ENSMUST00000199021 802 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm18504-201ENSMUST00000220917 929 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syngap1F6SEU4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Syngap1F6SEU4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms