Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Gm14219-201ENSMUST00000120414 288 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm22846-201ENSMUST00000157706 270 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm37826-201ENSMUST00000195329 322 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm42816-201ENSMUST00000198433 325 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm19091-201ENSMUST00000208120 978 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm10752-201ENSMUST00000218348 729 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.59□□□□□ -0.71
Vps50Q8CI71 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Vps50Q8CI71 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Vps50Q8CI71 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm25063-201ENSMUST00000104666 94 ntBASIC10.58□□□□□ -0.72
Vps50Q8CI71 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm14395-201ENSMUST00000120494 563 ntBASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm15329-201ENSMUST00000121408 155 ntBASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Mir1956-201ENSMUST00000157748 65 ntBASIC10.58□□□□□ -0.72
Vps50Q8CI71 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.58□□□□□ -0.72
Vps50Q8CI71 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 AC156802.2-203ENSMUST00000226032 1906 ntBASIC10.58□□□□□ -0.72
Vps50Q8CI71 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.58□□□□□ -0.72
Vps50Q8CI71 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Vps50Q8CI71 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.57□□□□□ -0.72
Vps50Q8CI71 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Vps50Q8CI71 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.57□□□□□ -0.72
Vps50Q8CI71 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Gm14807-201ENSMUST00000116640 983 ntBASIC10.57□□□□□ -0.72
Vps50Q8CI71 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.57□□□□□ -0.72
Vps50Q8CI71 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Mir1896-201ENSMUST00000122641 81 ntBASIC10.57□□□□□ -0.72
Vps50Q8CI71 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Vps50Q8CI71 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms