Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm25053-201ENSMUST00000103982 133 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm25922-201ENSMUST00000104281 130 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm11544-201ENSMUST00000120215 382 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm24679-201ENSMUST00000158762 111 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm24514-201ENSMUST00000174961 285 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm25053-202ENSMUST00000199731 132 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm18514-201ENSMUST00000218980 436 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm3619-201ENSMUST00000219947 775 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trub1Q8C0D0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm15604-201ENSMUST00000118350 1456 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11□□□□□ -0.65
Trub1Q8C0D0 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm38192-201ENSMUST00000194364 1847 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm6158-201ENSMUST00000109467 904 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm5764-201ENSMUST00000118817 885 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm12950-201ENSMUST00000121683 417 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms