Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm12947-201ENSMUST00000116114 420 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm15036-201ENSMUST00000118880 400 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm11979-201ENSMUST00000119629 743 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm12745-201ENSMUST00000121767 214 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm12453-201ENSMUST00000121981 331 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm6425-201ENSMUST00000136332 790 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm16547-201ENSMUST00000159474 293 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm37641-201ENSMUST00000193837 239 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm43778-201ENSMUST00000199438 199 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm18466-201ENSMUST00000209147 499 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm45258-201ENSMUST00000210042 853 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh19Q80TF3 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Gm25569-201ENSMUST00000157175 131 ntBASIC10.59□□□□□ -0.71
Pcdh19Q80TF3 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms