Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ift88Q61371 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ift88Q61371 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Gm15604-201ENSMUST00000118350 1456 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ift88Q61371 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ift88Q61371 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ift88Q61371 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ift88Q61371 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 Gm16071-201ENSMUST00000119589 793 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ift88Q61371 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.78□□□□□ -0.52
Ift88Q61371 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Gm6407-201ENSMUST00000176468 549 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 Gm17826-201ENSMUST00000189720 798 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.78□□□□□ -0.52
Ift88Q61371 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Gm44980-201ENSMUST00000205826 314 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.78□□□□□ -0.52
Ift88Q61371 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.78□□□□□ -0.52
Ift88Q61371 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ift88Q61371 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ift88Q61371 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ift88Q61371 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ift88Q61371 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ift88Q61371 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ift88Q61371 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.77□□□□□ -0.52
Ift88Q61371 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ift88Q61371 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.77□□□□□ -0.52
Ift88Q61371 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ift88Q61371 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ift88Q61371 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ift88Q61371 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.77□□□□□ -0.53
Ift88Q61371 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Gm15881-201ENSMUST00000148792 942 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ift88Q61371 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.77□□□□□ -0.53
Ift88Q61371 Gm43097-201ENSMUST00000196867 151 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Gm5881-201ENSMUST00000204737 367 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Gm9132-201ENSMUST00000210182 832 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Gm45867-201ENSMUST00000208201 2317 ntBASIC11.77□□□□□ -0.53
Ift88Q61371 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ift88Q61371 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ift88Q61371 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms