Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Atxn1P54254 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Atxn1P54254 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Atxn1P54254 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.71□□□□□ -0.69
Atxn1P54254 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Atxn1P54254 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Atxn1P54254 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm12961-201ENSMUST00000120507 1050 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Gm6441-201ENSMUST00000120983 696 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Gm11952-201ENSMUST00000121172 821 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Gm14176-201ENSMUST00000121302 477 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Gm13505-201ENSMUST00000121666 817 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 AA623943-201ENSMUST00000121794 354 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Gm16210-201ENSMUST00000122161 610 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm26943-201ENSMUST00000182295 957 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.71□□□□□ -0.69
Atxn1P54254 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Gm44420-201ENSMUST00000203669 490 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Atxn1P54254 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm5040-201ENSMUST00000218609 800 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.71□□□□□ -0.69
Atxn1P54254 AC125409.3-201ENSMUST00000223488 653 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Atxn1P54254 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Gm8730-201ENSMUST00000076373 954 ntBASIC10.71□□□□□ -0.69
Atxn1P54254 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atxn1P54254 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.7
Atxn1P54254 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.7
Atxn1P54254 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Atxn1P54254 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.71□□□□□ -0.7
Atxn1P54254 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Atxn1P54254 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Atxn1P54254 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.71□□□□□ -0.7
Atxn1P54254 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Atxn1P54254 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Atxn1P54254 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Atxn1P54254 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Atxn1P54254 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Atxn1P54254 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.7□□□□□ -0.7
Atxn1P54254 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.7□□□□□ -0.7
Atxn1P54254 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Gm6939-201ENSMUST00000122029 864 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.7□□□□□ -0.7
Atxn1P54254 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Atxn1P54254 Gm40332-201ENSMUST00000199847 938 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Gm44917-201ENSMUST00000208798 520 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Gm45893-201ENSMUST00000211899 247 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Gm3635-201ENSMUST00000212314 354 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC10.7□□□□□ -0.7
Atxn1P54254 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Krtap6-3-201ENSMUST00000079151 444 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.7□□□□□ -0.7
Atxn1P54254 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms