Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm23200-201ENSMUST00000104379 132 ntBASIC10.5□□□□□ -0.73
Slc1a6O35544 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.5□□□□□ -0.73
Slc1a6O35544 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc1a6O35544 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.5□□□□□ -0.73
Slc1a6O35544 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.5□□□□□ -0.73
Slc1a6O35544 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.5□□□□□ -0.73
Slc1a6O35544 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 AC153498.1-201ENSMUST00000219775 2722 ntBASIC10.49□□□□□ -0.73
Slc1a6O35544 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Gm14277-201ENSMUST00000121195 360 ntBASIC10.49□□□□□ -0.73
Slc1a6O35544 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Gm43671-201ENSMUST00000200422 433 ntBASIC10.49□□□□□ -0.73
Slc1a6O35544 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Gm38199-201ENSMUST00000192013 3277 ntBASIC10.49□□□□□ -0.73
Slc1a6O35544 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.49□□□□□ -0.73
Slc1a6O35544 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.49□□□□□ -0.73
Slc1a6O35544 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Slc1a6O35544 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Slc1a6O35544 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.48□□□□□ -0.73
Slc1a6O35544 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Slc1a6O35544 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Slc1a6O35544 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Gm37975-201ENSMUST00000195494 2099 ntBASIC10.48□□□□□ -0.73
Slc1a6O35544 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.48□□□□□ -0.73
Slc1a6O35544 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Slc1a6O35544 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms