Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Pcdh1F7BJK1 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm13284-201ENSMUST00000121020 547 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm16570-201ENSMUST00000161951 436 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm5244-201ENSMUST00000164001 339 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm4654-201ENSMUST00000183305 982 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm29543-201ENSMUST00000188138 967 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm37905-201ENSMUST00000195310 341 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Mt1-202ENSMUST00000211807 1085 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Spcs1-203ENSMUST00000226374 592 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 AC126459.1-201ENSMUST00000214791 2123 ntBASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Pcdh1F7BJK1 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 AC153498.1-201ENSMUST00000219775 2722 ntBASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pcdh1F7BJK1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms