Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Mir1249-201ENSMUST00000116791 98 ntBASIC9.47□□□□□ -0.89
Scrt1Q99M85 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Gm24294-201ENSMUST00000158295 277 ntBASIC9.47□□□□□ -0.89
Scrt1Q99M85 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Snord55-201ENSMUST00000174939 79 ntBASIC9.47□□□□□ -0.89
Scrt1Q99M85 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Gm17944-201ENSMUST00000186351 643 ntBASIC9.47□□□□□ -0.89
Scrt1Q99M85 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 AC154407.1-201ENSMUST00000226777 526 ntBASIC9.47□□□□□ -0.89
Scrt1Q99M85 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.47□□□□□ -0.89
Scrt1Q99M85 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.46□□□□□ -0.89
Scrt1Q99M85 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.46□□□□□ -0.89
Scrt1Q99M85 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Scrt1Q99M85 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm23132-201ENSMUST00000104254 132 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm11380-201ENSMUST00000118067 560 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm4943-201ENSMUST00000132879 424 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm4868-201ENSMUST00000164138 789 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Zcwpw2-203ENSMUST00000187803 372 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm6794-201ENSMUST00000203829 457 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 CT030195.2-201ENSMUST00000226074 1286 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Scrt1Q99M85 n-R5s71-201ENSMUST00000093668 119 ntBASIC9.46□□□□□ -0.9
Scrt1Q99M85 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Scrt1Q99M85 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms